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Showing :
repeated measures
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reset
7
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9
replies
5.0k
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LIMMA: interpreting interaction terms in an unbalanced factorial design with repeated measures
LIMMA
FACTORIAL
REPEATED MEASURES
differential gene expression
8.7 years ago • updated 8.6 years ago
robert.maughan
• 0
8
votes
11
replies
2.4k
views
dream vignette says limma-voom repeated measures two-group comparison needs two duplicateCorrelation rounds which differs from limma user's guide and…
dream
variancePartition
limma
differential expression
repeated measures
updated 4.6 years ago by
Gordon Smyth
50k • written 4.6 years ago by
hermidalc
▴ 20
6
votes
5
replies
2.1k
views
Incorporating subject ID as random effect for repeated measures RNA-Seq analysis
limma
rna-seq
mixed model
repeated measures
updated 5.7 years ago by
Gordon Smyth
50k • written 5.7 years ago by
mikhael.manurung
▴ 270
2
votes
5
replies
1.4k
views
SVA for repeated measures design
SVA
deseq2
repeated measures
updated 4.6 years ago by
Robert Castelo
★ 3.3k • written 4.7 years ago by
sara.blocquiaux
• 0
1
vote
2
replies
854
views
Time series experiment analysis in DEseq2 without T=0 and three independent experiments with linked samples
deseq2
rnaseq
repeated measures
time series
design formula
updated 4.3 years ago by
Michael Love
42k • written 4.3 years ago by
Dorien
▴ 10
0
votes
1
reply
4.0k
views
DESeq2 - How to study time course experiment taking subject variability into account?
deseq2
repeated measures
time course
updated 6.3 years ago by
Michael Love
42k • written 6.3 years ago by
Marion
• 0
3
votes
2
replies
1.6k
views
Repeated Measures, Within-Subject, Between-Groups RNAseq Analysis
edgeR
rnaseq
repeated measures
updated 6.1 years ago by
Ryan C. Thompson
★ 7.9k • written 6.1 years ago by
wjh180
• 0
0
votes
4
replies
592
views
DESeq2 for repeated/clustered samples
deseq2
repeated measures
updated 4.4 years ago by
Michael Love
42k • written 4.4 years ago by
jperin
• 0
0
votes
0
replies
852
views
Model in metagenomeSeq
repeated measures
8.6 years ago
PJ
• 0
9 results • Page
1 of 1
Recent ...
Replies
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
jane
• 0
Your material was totally correct, therefore I was able to learn what I needed to know. I'd want to convey my heartfelt gratitude for shari…
Comment: all variables in design formula must be columns in colData (Deseq2) error
by
Galina
• 0
thank you!
Comment: all variables in design formula must be columns in colData (Deseq2) error
by
ATpoint
★ 4.1k
coldata_rat <- data.frame(conditions=..., batch=...)
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
robersy
• 0
Thank you all for your comments. I will follow your suggestions.
Comment: Numerical differences in DESeq2 output depending on different design matrix cons
by
Ken C
• 0
Hi Michael, thanks a lot for your prompt reply! Not sure if this is appropriate or if you are the right person to ask -- is there anything…
Votes
biomaRt not working - lazy table error
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
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